If you’re looking for a comforting, creamy, and nourishing twist on a classic favorite, then this A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe is going to steal your heart. It’s the perfect balance of velvety texture and rich flavors without any heaviness, thanks to the natural sweetness of roasted butternut squash and the protein-packed creaminess of silken tofu. You’ll enjoy every bite knowing you’ve indulged in something both wholesome and delicious, making it an instant family favorite for cozy nights in.

Ingredients You’ll Need

The image shows four cooked eggplants on a worn green baking tray with scratches and dark spots. Two eggplants are long and oval with a lightly browned and slightly wrinkled skin, placed parallel to each other on the left side. The other two eggplants are rounder, also with browned and wrinkled skin, positioned on the right side of the tray. The tray is set on a white marbled textured surface with a striped cloth peeking from the top left corner. photo taken with an iphone --ar 4:5 --v 7

Getting the ingredients right is half the fun because each one plays a special role in creating that luscious mac and cheese experience. These simple yet essential components come together to build layers of flavor, texture, and inviting color that make this dish irresistible.

  • Half a medium butternut squash: Roasting it brings out sweetness that creates the rich base of the sauce.
  • One 16-ounce pack of silken tofu: Adds creamy texture and plant-based protein without overpowering the dish.
  • Two cups freshly shredded cheddar cheese: The melty, savory highlight that makes this macaroni truly cheesy.
  • Quarter cup extra-virgin olive oil: Infuses a smooth richness and helps marry the spices to the sauce.
  • Half teaspoon mustard powder: Adds a gentle kick and depth of flavor without heat.
  • Half teaspoon garlic powder: Brings warm earthiness that complements both cheese and squash.
  • Half teaspoon white pepper: For subtle spice that doesn’t overwhelm the creamy sauce.
  • Diamond Crystal kosher salt: Essential for seasoning and balancing all the flavors.
  • Freshly cracked black pepper: Adds a lively bite and aroma for finishing touches.
  • 16 ounces dried pasta of your choice: Look for sturdy shapes like elbow macaroni or shells that cradle the sauce beautifully.

How to Make A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe

Step 1: Roast the Butternut Squash

Start by positioning your oven rack in the center and preheating to 400°F. Place your halved butternut squash cut-side down on a baking sheet to roast for 30 to 40 minutes. This roasting step is crucial—it softens the squash fully and unlocks its natural sweetness, which is the backbone of the sauce’s creamy texture and subtle sweetness.

Step 2: Prepare the Squash and Tofu Purée

Once the squash is fork tender, scoop out about one cup (210 grams) of the flesh and add it to a blender. Add the entire pack of silken tofu right with it. Thanks to the moisture in the tofu, they blend into a smooth, creamy purée—if blending is a bit tricky, a tablespoon of water at a time will help you get there. This purée is what makes this A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe so wonderfully creamy without heavy cream or butter.

Step 3: Grate the Cheese and Prepare the Pasta

While the squash cools slightly, grate your cheddar cheese so it’s ready to melt smoothly into the sauce. On the stove, heat two pots side by side: one to make the cheese sauce and the other to boil your pasta. Bring the pasta water to a rolling boil—you’ll add your dried pasta here soon—while you start the sauce base.

Step 4: Infuse the Olive Oil with Spices

In your Dutch oven, warm the extra-virgin olive oil over medium heat. Add the mustard powder, garlic powder, and white pepper, letting the spices gently sizzle for just over a minute to bloom their flavors. This step builds an aromatic base that makes this mac and cheese sing with every bite.

Step 5: Combine the Tofu-Squash Purée with the Spices

Immediately pour your tofu and squash purée into the spiced oil, mixing well. Season liberally with kosher salt and freshly cracked black pepper. This layers essential seasoning directly into the sauce, rounding out the flavors before you add cheese.

Step 6: Cook the Pasta and Build the Cheese Sauce

Add a tablespoon of kosher salt to the boiling water and drop in the pasta, cooking it until al dente following package instructions. Meanwhile, slowly add cheddar cheese to the tofu-squash mixture, a handful at a time, stirring constantly so the cheese melts into a velvety sauce. To loosen the sauce and help it cling beautifully to the pasta, reserve about 1/4 to 1/2 cup of pasta water and stir it in gradually.

Step 7: Bring It All Together

Use a slotted spoon to transfer the cooked pasta directly into your cheese sauce. Gently stir to combine, adding extra pasta water if needed for a luscious, glossy finish. This method makes sure every noodle is generously coated with that creamy, flavorful sauce that’s the hallmark of A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe.

How to Serve A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe

A close-up top view of a clear blender jar filled with a smooth, creamy orange sauce or puree. The sauce has a thick texture with slight shiny swirls and small bubbles on the surface, showing it has just been mixed. The jar is placed on a white marbled texture surface. photo taken with an iphone --ar 4:5 --v 7

Garnishes

Sprinkle some freshly chopped parsley or chives for a pop of bright green color and fresh flavor contrast. A dusting of smoked paprika or a pinch of crispy toasted breadcrumbs on top adds lovely texture and visual appeal. These little touches take this comforting dish from simple to spa day for your taste buds.

Side Dishes

This macaroni and cheese pairs beautifully with crisp, vibrant salads like a tangy arugula with lemon vinaigrette or roasted Brussels sprouts with balsamic glaze. For added substance, steamed green beans or garlic-roasted broccoli offer a nutritious, crunchy side that complements the silky, savory pasta perfectly.

Creative Ways to Present

Serve it in mini cast-iron skillets or individual oven-safe ramekins for a fun, personal touch—great for dinner parties or family gatherings. You can also layer it into a casserole dish with extra cheese on top, broiling it briefly until the top is golden and bubbly for a crowd-pleasing crust.

Make Ahead and Storage

Storing Leftovers

This dish reheats wonderfully and will keep for up to 4 days in an airtight container in the refrigerator. Store the sauce and pasta together so the flavors continue to meld, making each reheated bite as tasty as the first.

Freezing

You can freeze leftovers in a freezer-safe container for up to 3 months. When freezing, leave out fresh garnishes and add them fresh after reheating to keep things bright and crunchy.

Reheating

Reheat gently on the stovetop over low heat or in the microwave, stirring occasionally. Add a splash of water or milk to loosen the sauce if it thickens too much during storage. This helps maintain that signature creaminess of A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe.

FAQs

Can I use a different type of squash?

Absolutely! While butternut squash is great for its natural sweetness and texture, you can try kabocha or acorn squash for a slightly different flavor profile—just make sure to roast until tender.

Is silken tofu necessary in this recipe?

Silken tofu is key for that smooth, creamy consistency without dairy. If you want a vegan version, this tofu-based sauce is perfect. For a dairy-free option, simply use a blend of nutritional yeast and plant milk instead of cheddar.

What pasta shapes work best?

Choose pasta with nooks and curves like elbows, shells, or cavatappi so they hold onto the sauce well. But really, your favorite pasta will work just fine!

Can I make this recipe gluten-free?

Definitely! Use any gluten-free pasta variety, and double-check your spices to ensure they’re gluten-free as well. The sauce remains beautifully creamy and flavorful.

How spicy is this mac and cheese?

This dish keeps spice mild and comforting with white pepper and mustard powder adding gentle warmth but no heat. If you want a little kick, try adding a pinch of cayenne pepper during the spice step.

Final Thoughts

If you’re craving a classic comfort food that feels hearty yet nourishing, you’ll love diving into this A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe. It’s a delicious way to savor familiar flavors with a nourishing twist that’s perfect for weeknight dinners or special occasions alike. I encourage you to give it a try, and watch it quickly become your go-to dish for cozy, wholesome comfort in every bite!

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A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe

A Healthier Baked Butternut Squash and Tofu Macaroni and Cheese Recipe

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4.2 from 28 reviews

This healthier boxed macaroni and cheese recipe replaces traditional heavy cream and butter with roasted butternut squash and silken tofu, creating a creamy, flavorful sauce that still delivers on comfort and richness. With a blend of spices, cheddar cheese, and olive oil, it offers a nutritious twist on a classic favorite, making it perfect for a family meal that’s both satisfying and wholesome.

  • Total Time: 43 minutes
  • Yield: 4 servings

Ingredients

Vegetables and Dairy

  • 1/2 medium butternut squash (enough to yield 210 grams, 7.5 ounces)
  • 2 cups freshly shredded cheddar cheese (5 ounces)

Dairy Substitute

  • 1 16 ounce pack of silken tofu

Pantry Items

  • 1/4 cup extra-virgin olive oil
  • 1/2 teaspoon mustard powder
  • 1/2 teaspoon garlic powder
  • 1/2 teaspoon white pepper
  • Diamond Crystal kosher salt
  • Freshly cracked black pepper
  • 16 ounces dried pasta of choice

Instructions

  1. Preheat Oven: Position a rack in the center of the oven and preheat to 400°F to prepare for roasting the butternut squash.
  2. Roast Butternut Squash: Place the squash cut-side-down on a baking sheet and roast for 30-40 minutes, or until softened throughout when pierced with a fork.
  3. Prepare Squash Purée: Once the squash is tender, remove it from the oven, scoop out 1 cup (210 grams) of the flesh, and add it to a blender.
  4. Add Tofu: Add the entire 16-ounce pack of silken tofu to the blender with the squash. Blend until smooth, adding water by tablespoons if necessary to achieve a creamy texture. Set aside.
  5. Grate Cheese: Grate the cheddar cheese and set aside for later use.
  6. Boil Water and Heat Dutch Oven: On the stovetop, place a Dutch oven on one burner set to medium heat and a pot of water next to it. Bring the water to a boil for pasta cooking.
  7. Sauté Spices: Add 1/4 cup olive oil to the Dutch oven. Stir in mustard powder, garlic powder, and white pepper, letting the spices sizzle in the oil for about a minute.
  8. Add Squash-Tofu Mixture: Immediately add the blended squash and tofu to the spiced oil, stirring well. Season with kosher salt and freshly cracked black pepper to taste.
  9. Cook Pasta: Add 1 tablespoon of kosher salt to the boiling water, then add the pasta. Cook according to package directions until al dente.
  10. Incorporate Cheese into Sauce: Gradually add the grated cheddar cheese to the sauce, a small handful at a time, stirring continuously to melt it smoothly into the sauce. Adjust seasoning with salt and pepper as needed.
  11. Adjust Sauce Consistency: Stir in 1/4 cup (up to 1/2 cup) of the reserved pasta cooking water to the sauce to help emulsify and create a creamy texture.
  12. Combine Pasta and Sauce: Using a slotted spoon, transfer the cooked pasta directly into the sauce. Stir well to coat the noodles evenly, adding additional pasta water as needed for optimal creaminess.

Notes

  • The intensity of the cheesy flavor can be adjusted by varying the amount of cheddar cheese added to the sauce.
  • Using silken tofu adds creaminess while keeping the sauce lower in fat compared to traditional heavy cream or butter-based mac and cheese.
  • Allow roasting the butternut squash a bit longer if it’s not fork-tender to ensure a silky smooth purée.
  • Reserve extra pasta water as it helps to adjust sauce consistency and improves sauce adhesion to pasta.
  • For a gluten-free option, substitute the dried pasta with gluten-free pasta varieties.
  • Author: Madelynn
  • Prep Time: 10 minutes
  • Cook Time: 33 minutes
  • Category: Main Course
  • Method: Baking
  • Cuisine: American
  • Diet: Low Fat

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